Retrieve co-expressed genes for your query genes
Wheat grain coexpression database:A total of 90 RNA-seq data of wheat grain samples from 14 studies, were used for co-expression analysis(
PRJNA396738,
PRJNA407398,
PRJNA427246,
PRJNA471426,
PRJNA477934,
PRJNA485741,
PRJEB25639,
PRJEB5314,
PRJEB5135,
PRJEB22854,
PRJEB7795,
PRJNA322418,
PRJNA358808 and
PRJNA532455).
Wheat multiple tissues from
PRJEB25639.
Shifting the limits in wheat research and breeding using a fully annotated reference genome. International Wheat Genome Sequencing C, investigators IRp, Appels R, Eversole K, Feuillet C, Keller B, et al. Science 2018 361 eaar7191.
doi: 10.1126/science.aar7191
MR, an algorithm for calculating the rank of PCC, takes a geometric average of the PCC rank from gene A to gene B and from gene B to gene A.
Obayashi T, Kinoshita K. Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression. DNA Res. 2009;16(5):249–260.
doi:10.1093/dnares/dsp016