Genomic variation datasets of wheat and its progenitors.
Collinearity-incorporating homology database for Triticeae genomes.
A chromatin state interface for Chinese Spring bread wheat.
For more information,please visit wheat URGI website.
Bian. X, Tyrrell. S, Davey R.P. The Grassroots life science data infrastructure (2017). https://grassroots.tools.
AutoCloner is a custom pipeline that designs homeologue-specific primers for polyploids. It achieves this by extracting SNP locations unique to your gene of interest, and placing the 3` ends of primers at these SNPs
PaperBLAST builds a database of protein sequences that are linked to scientific articles. These links come from automated text searches against the articles in EuropePMC and from manually-curated information from GeneRIF, UniProtKB/Swiss-Prot, BRENDA, CAZy (as made available by dbCAN), CharProtDB, MetaCyc, EcoCyc, TCDB, REBASE, and the Fitness Browser. Given this database and a protein sequence query, PaperBLAST uses protein-protein BLAST to find similar sequences with E < 0.001.
GrainGenes, a database for Triticeae and Avena, is a comprehensive resource for molecular and phenotypic information for wheat, barley, rye, and other related species, including oat.
the International Wheat Genome Sequencing Consortium
T3 is a repository for public wheat data generated by the Wheat Coordinated Agricultural Project (Wheat CAP).
CRISPR-Cereal: A Guide RNA Design Tool Integrating Regulome and Genomic Variation for Wheat, Maize and Rice.
PPRD:Search gene expression levels from 5,816 Triticum aestivum RNA-Seq libraries.
a pangenome graph database representing presence/absence variation across 16 bread wheat genomes.
Genetic Relationship Information Database for Wheat Germplasms.
Utility of Triti-Map for bulk-segregated mapping of causal genes and regulatory elements in Triticeae.